Identification and analysis of antimicrobial biosynthetic genes in marine microbial symbionts (Record no. 194288)

000 -LEADER
fixed length control field 02629nam a22001697a 4500
082 ## - DEWEY DECIMAL CLASSIFICATION NUMBER
Classification number 660.6
Item number AKH/ID PG
100 ## - MAIN ENTRY--PERSONAL NAME
Personal name Akhitha Mary Benny
245 ## - TITLE STATEMENT
Title Identification and analysis of antimicrobial biosynthetic genes in marine microbial symbionts
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc Velliyani
Name of publisher, distributor, etc Department of Plant Biotechnology, College of Agriculture,
Date of publication, distribution, etc 2019
300 ## - PHYSICAL DESCRIPTION
Extent 125p
502 ## - DISSERTATION NOTE
Dissertation note B.Sc.-M.Sc. Int.
520 3# - SUMMARY, ETC.
Abstract Contagious spread of drug resistant strains as well as newer diseases necessitates the development of novel antibacterial agents which led scientists to explore new niches like marine habitat and associated marine microbes. Therefore, the present study aimed to check whether the microbes associated with unexplored marine invertebrates namely, P. viridis, C. feriatus, P. pelagicus, P. sanguinolentus and S. olivacea have antimicrobial activity against human and aquatic pathogens including some MDR (Multi Drug Resistant) strains. Additionally, antimicrobial biosynthetic genes namely, NRPS (Non ribosomal peptide synthetase) and PKS (Polyketide synthase) associated with the positive isolates was isolated and analyzed. Out of 123 isolates screened against 12 indicator pathogens, 27 isolates showed antibacterial activity and the isolates with maximum activities were identified as Staphylococcus pasteuri and Pseudomonas aeruginosa. When these isolates were screened for the presence of NRPS and PKS genes, 9, 2 and 4 of them showed the presence of NRPS, PKS and both NRPS and PKS genes respectively. A non-parametric statistical analysis using Mann Whitney U test showed that the presence of NRPS/PKS gene has statistically significant influence on the total activity scores (p<0.05) and the scores was statistically significantly higher in NRPS/PKS positive isolates than the negative isolates. Detailed in-silico analysis of these amplicons to predict their activity, revealed two new NRPS ‘A’ domain binding signature and detected 4 antagonistic microbes with previously uncharacterized NRPS products from the marine crab haemolymph associated bacterial collections. The present study successfully generated NRPS gene sequences from four antagonistic bacterial species for which information of NRPS ‘A’ domain was not available earlier. Altogether, the study supports the hypothesis stating that marine invertebrate bacterial associations can provide strains having future biotechnological and pharmaceutical applications in aquaculture industry.
650 ## - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Plant Biotechnology
700 ## - ADDED ENTRY--PERSONAL NAME
Personal name Sumithra T.G.(Guide)
856 ## - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier https://krishikosh.egranth.ac.in/handle/1/5810151913
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme
Item type Theses
Holdings
Not for loan Collection code Permanent location Current location Shelving location Date acquired Full call number Barcode Date last seen Koha item type
Not For Loan Reference Book KAU Central Library, Thrissur KAU Central Library, Thrissur Theses 2020-05-05 660.6 AKH/ID PG 174782 2020-05-05 Theses
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