Molecular taxonomy of selected species of macrobrachium bate, 1868 (DECAPODA, PALAEMONIDAE) of Kerala waters

Abstract

Freshwater prawns of the genus Macrobrachium are a conspicuous and important prawn constitute one of the most diverse, abundant and widespread crustacean genera. They are distributed in different water bodies of the tropical and subtropical regions of the world and comprises over 200 described species (Jayachandran, 2001). The palaenonids have taxonomically difficult groups because they appear to be morphologically higher conservative and also greater confusion among the evolutionary status. The present study was carried out both on morphological and molecular data to investigate the confirmation of species status and finding phylogenetic relationship of selected species of Macrobrachium in kerala waters. The species of M. canarae, M. idella, M. latimanus and M. scabriculum were collected from different water bodies of kerala, such as hill streams, rivers and brackish water. The four species inhabit varied habitats: M. latimanus is a hill stream prawn; M. canarae inhabits valleys without migration; M. idella and M. scabriculum inhabits lower stretches of river with estuarine migrations. These species were accurately identified based on morphology of earlier literature done by Jayachandran, 2001 and it shows variations within the individuals of M. idella. The use of DNA based methods to infer phylogenetic relationship can potentially overcome some of the difficulties encountered through the use of morphological characters. In molecular part, 16S rRNA and COI genes of mitochondrial DNA were analysed. Sequences of 16S rRNA and COI were obtained and submitted to NCBI. Based on sequence information, M. canarae shows few minor variations within the individuals. M. idella is shows significant variations within the two types of individuals. M. latimanus is shows separate clades of other country species. M. scabriculum is also shows significant variation with NCBI sequence of M. scabriculum. Phylogenetic relationship is clearly shows two types of M. idella based on NJ and MP tree. Hence, both morphological and molecular data is very effective for finding species variants and phylogeny.